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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906215.1_cds_XP_016456425.1_50260
CDS Infomation

[gene=LOC107780405] [db_xref=GeneID:107780405] [protein=patatin-like phospholipase domain-containing protein 4 isoform X4] [protein_id=XP_016456425.1] [location=join(19..546,1896..2039,2500..2572,2678..2783,2877..2973,3865..3903)] [gbkey=CDS]
Sequence

ATGTCTTCCCTTTTCCTCTCAAACCCTCGTCCTTTTCGCCCTCCTCTAAACCCTAAATCC
AATCCCCATGTCGTTTTCCCACTTCGTACCCTCAATTTCTCCGCCAATTCTACCCCACCC
CCTCCTCCTCCTCCGAACCCCAATACAAAACCACCCACCATCAAAGAACCTCCCTTTCCC
CCTCCTCCGCTGGAGGCGGCATCGGAGGAGAAGAAGTCATTCGCGGTGGCGACCGGCGAG
CTTTTCCTTGGCATTGCATCACGAGTTTTGAGGCGTGGGAATAGTATAGTTAATGGTGCA
GAAGAGAGTGAATCGTACTTTTGGGAACGGAGAAAGGAAGGGATAGCGACGGTGGTTGAG
GACCCGGTTCAGCCGGAGGTTGTGTGGGAGCAGAGGGAAAAAGATGTGGAAGCTGAGAAG
AGCATGAAAACGGTGACTAGCCCTGGGTTTAGCTTCTCTGCTGCTGGGCTTTTGTTTCCT
TATCATCTTGGGGTTGCTAAGCTTCTCATTGAGAAGGGCTATATCAAGGAGACAACACCA
CTGGCTGGTTCTTCTGCTGGTGCAATTGTATGTGCAGTGGTCGCTTCTGGTGCGAGTATG
CAAGAGGCTCTAGATGCTACCAAAATATTAGCTCAAGATTGTCGGCTCAGCGGGACAGCA
TTTCGCCTTGGTGCTGTTCTTAGAGAAATTCTTGAGAAATTTCTTCCAGTTGATGCTCAT
ATTAGGTGCAACGGAAGAGTTCGTGTTGCTGTAACACAGATACTTTGGAGGCCCAGAGGC
TTATTGGTTGATCAGTTTGATTCTAAGGAGGATCTTATCAATGCTGTCTTTACTTCTTCT
TTTATCCCAGGATATCTTGCTCCAAGGCCAGCCACACTTTTCAGGAATAAACTTTGTATT
GATGGGGGACTAACACTGTTTATGCCACCTACATCTGCTGCCCAGACGTTCCACAATAGA
AACAGCGGTGACTTATCAGGATATTGA

Peptide Sequence

PEP ID

XP_016456425.1
PEP Infomation

PREDICTED: patatin-like phospholipase domain-containing protein 4 isoform X4 [Nicotiana tabacum]
Sequence

MSSLFLSNPRPFRPPLNPKSNPHVVFPLRTLNFSANSTPPPPPPPNPNTKPPTIKEPPFP
PPPLEAASEEKKSFAVATGELFLGIASRVLRRGNSIVNGAEESESYFWERRKEGIATVVE
DPVQPEVVWEQREKDVEAEKSMKTVTSPGFSFSAAGLLFPYHLGVAKLLIEKGYIKETTP
LAGSSAGAIVCAVVASGASMQEALDATKILAQDCRLSGTAFRLGAVLREILEKFLPVDAH
IRCNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPATLFRNKLCI
DGGLTLFMPPTSAAQTFHNRNSGDLSGY

Transcript Sequence

Gene sequence data has not been registered.